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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
P35241
USC-OGP 2-DE database
:
P35241
P35241
General information about the entry
View entry in simple text format
Entry name
RADI_HUMAN
Primary accession number
P35241
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=Radixin;.
Gene name
Name=RDX
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
UVEAL_MELANOMA_3-10
{UVEAL MELANOMA 3-10}
Homo sapiens (Human)
map experimental info
UVEAL_MELANOMA_3-10
MAP LOCATIONS:
SPOT OGP-1120
:
pI=6.09; Mw=84978
Cross-references
UniProtKB/Swiss-Prot
P35241; RADI_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
RADI_HUMAN
Primary accession number
P35241
Secondary accession number(s)
A7YIJ8 A7YIK0 A7YIK3 B7Z9U6 F5H1A7 Q86Y61
Sequence was last modified on
February 1, 1994 (version 1)
Annotations were last modified on
March 15, 2017 (version 163)
Name and origin of the protein
Description
RecName: Full=Radixin;
Gene name
Name=RDX
Encoded on
Name=RDX
Keywords
Actin capping
;
Actin-binding
;
Alternative splicing
;
Cell membrane
;
Complete proteome
;
Cytoplasm
;
Cytoskeleton
;
Deafness
;
Disease mutation
;
Membrane
;
Non-syndromic deafness
;
Phosphoprotein
;
Polymorphism
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
L02320; AAA36541.1
; -; mRNA
EMBL
AK316061; BAH14432.1
; -; mRNA
EMBL
DQ916738; ABI34710.1
; -; mRNA
EMBL
DQ916739; ABI34711.1
; -; mRNA
EMBL
DQ916741; ABI34713.1
; -; mRNA
EMBL
DQ916742; ABI34714.1
; -; mRNA
EMBL
DQ916740; ABI34712.1
; -; mRNA
EMBL
AP000901; -
; NOT_ANNOTATED_CDS; Genomic_DNA
EMBL
AP002788; -
; NOT_ANNOTATED_CDS; Genomic_DNA
EMBL
CH471065; EAW67129.1
; -; Genomic_DNA
EMBL
BC047109; AAH47109.1
; -; mRNA
CCDS
CCDS58171.1; -. [P35241-2]
; .
CCDS
CCDS58172.1; -. [P35241-4]
; .
CCDS
CCDS58173.1; -. [P35241-3]
; .
CCDS
CCDS58174.1; -. [P35241-5]
; .
CCDS
CCDS8343.1; -. [P35241-1]
; .
PIR
A46127; A46127
; .
RefSeq
NP_001247421.1; NM_001260492.1. [P35241-5]
; .
RefSeq
NP_001247422.1; NM_001260493.1. [P35241-5]
; .
RefSeq
NP_001247423.1; NM_001260494.1. [P35241-4]
; .
RefSeq
NP_001247424.1; NM_001260495.1. [P35241-2]
; .
RefSeq
NP_001247425.1; NM_001260496.1. [P35241-3]
; .
RefSeq
NP_002897.1; NM_002906.3. [P35241-1]
; .
UniGene
Hs.263671; -
; .
UniGene
Hs.584560; -
; .
UniGene
Hs.741211; -
; .
ProteinModelPortal
P35241; -
; .
SMR
P35241; -
; .
BioGrid
111894; 71
; .
IntAct
P35241; 11
; .
MINT
MINT-1536950; -
; .
STRING
9606.ENSP00000342830; -
; .
iPTMnet
P35241; -
; .
PhosphoSitePlus
P35241; -
; .
SwissPalm
P35241; -
; .
BioMuta
RDX; -
; .
DMDM
464541; -
; .
EPD
P35241; -
; .
MaxQB
P35241; -
; .
PaxDb
P35241; -
; .
PeptideAtlas
P35241; -
; .
PRIDE
P35241; -
; .
Ensembl
ENST00000343115; ENSP00000342830
; ENSG00000137710. [P35241-1]; .
Ensembl
ENST00000405097; ENSP00000384136
; ENSG00000137710. [P35241-5]; .
Ensembl
ENST00000528498; ENSP00000432112
; ENSG00000137710. [P35241-5]; .
Ensembl
ENST00000528900; ENSP00000433580
; ENSG00000137710. [P35241-2]; .
Ensembl
ENST00000530301; ENSP00000436277
; ENSG00000137710. [P35241-3]; .
Ensembl
ENST00000530749; ENSP00000437301
; ENSG00000137710. [P35241-5]; .
Ensembl
ENST00000544551; ENSP00000445826
; ENSG00000137710. [P35241-4]; .
GeneID
5962; -
; .
KEGG
hsa:5962; -
; .
UCSC
uc001pku.4; human. [P35241-1]
; .
CTD
5962; -
; .
DisGeNET
5962; -
; .
GeneCards
RDX; -
; .
GeneReviews
RDX; -
; .
HGNC
HGNC:9944; RDX
; .
HPA
CAB037312; -
; .
HPA
HPA000263; -
; .
HPA
HPA000763; -
; .
MalaCards
RDX; -
; .
MIM
179410; gene
; .
MIM
611022; phenotype
; .
neXtProt
NX_P35241; -
; .
OpenTargets
ENSG00000137710; -
; .
Orphanet
90636; Autosomal recessive non-syndromic sensorineural deafness type DFNB
; .
PharmGKB
PA34311; -
; .
eggNOG
KOG3529; Eukaryota
; .
eggNOG
ENOG410XQFP; LUCA
; .
GeneTree
ENSGT00860000133686; -
; .
HOGENOM
HOG000007113; -
; .
HOVERGEN
HBG002185; -
; .
InParanoid
P35241; -
; .
KO
K05762; -
; .
OMA
LSREDSM; -
; .
OrthoDB
EOG091G06UO; -
; .
PhylomeDB
P35241; -
; .
TreeFam
TF313935; -
; .
Reactome
R-HSA-437239; Recycling pathway of L1
; .
SIGNOR
P35241; -
; .
ChiTaRS
RDX; human
; .
GeneWiki
Radixin; -
; .
GenomeRNAi
5962; -
; .
PRO
PR:P35241; -
; .
Proteomes
UP000005640; Chromosome 11
; .
Bgee
ENSG00000137710; -
; .
CleanEx
HS_RDX; -
; .
ExpressionAtlas
P35241; baseline and differential
; .
Genevisible
P35241; HS
; .
GO
GO:0016324; C:apical plasma membrane
; IDA:UniProtKB; .
GO
GO:0071944; C:cell periphery
; IDA:UniProtKB; .
GO
GO:0051286; C:cell tip
; IEA:Ensembl; .
GO
GO:0005913; C:cell-cell adherens junction
; IEA:Ensembl; .
GO
GO:0032154; C:cleavage furrow
; IEA:UniProtKB-SubCell; .
GO
GO:0030864; C:cortical actin cytoskeleton
; ISS:UniProtKB; .
GO
GO:0070062; C:extracellular exosome
; IDA:UniProtKB; .
GO
GO:0005615; C:extracellular space
; IDA:UniProtKB; .
GO
GO:0019898; C:extrinsic component of membrane
; IEA:InterPro; .
GO
GO:0030175; C:filopodium
; ISS:UniProtKB; .
GO
GO:0005925; C:focal adhesion
; IDA:UniProtKB; .
GO
GO:0030027; C:lamellipodium
; ISS:UniProtKB; .
GO
GO:0005902; C:microvillus
; ISS:UniProtKB; .
GO
GO:0030496; C:midbody
; IEA:Ensembl; .
GO
GO:0043209; C:myelin sheath
; IEA:Ensembl; .
GO
GO:0005886; C:plasma membrane
; IDA:HPA; .
GO
GO:0001726; C:ruffle
; IEA:Ensembl; .
GO
GO:0032420; C:stereocilium
; IEA:Ensembl; .
GO
GO:0030315; C:T-tubule
; IEA:Ensembl; .
GO
GO:0003779; F:actin binding
; IDA:UniProtKB; .
GO
GO:0051117; F:ATPase binding
; IPI:UniProtKB; .
GO
GO:0045296; F:cadherin binding
; IDA:BHF-UCL; .
GO
GO:0042803; F:protein homodimerization activity
; ISS:UniProtKB; .
GO
GO:0051018; F:protein kinase A binding
; ISS:UniProtKB; .
GO
GO:0003723; F:RNA binding
; IDA:UniProtKB; .
GO
GO:0045176; P:apical protein localization
; IEA:Ensembl; .
GO
GO:0051016; P:barbed-end actin filament capping
; IEA:Ensembl; .
GO
GO:0036120; P:cellular response to platelet-derived growth factor stimulus
; IEA:Ensembl; .
GO
GO:0097067; P:cellular response to thyroid hormone stimulus
; ISS:UniProtKB; .
GO
GO:0061028; P:establishment of endothelial barrier
; IGI:UniProtKB; .
GO
GO:0045184; P:establishment of protein localization
; ISS:UniProtKB; .
GO
GO:0090002; P:establishment of protein localization to plasma membrane
; IMP:UniProtKB; .
GO
GO:0030033; P:microvillus assembly
; IEA:Ensembl; .
GO
GO:1903392; P:negative regulation of adherens junction organization
; IMP:UniProtKB; .
GO
GO:0045792; P:negative regulation of cell size
; IMP:UniProtKB; .
GO
GO:0034260; P:negative regulation of GTPase activity
; IMP:UniProtKB; .
GO
GO:0034111; P:negative regulation of homotypic cell-cell adhesion
; IMP:UniProtKB; .
GO
GO:0030335; P:positive regulation of cell migration
; IMP:UniProtKB; .
GO
GO:1903364; P:positive regulation of cellular protein catabolic process
; IGI:UniProtKB; .
GO
GO:2000643; P:positive regulation of early endosome to late endosome transport
; IGI:UniProtKB; .
GO
GO:1900087; P:positive regulation of G1/S transition of mitotic cell cycle
; ISS:UniProtKB; .
GO
GO:0010628; P:positive regulation of gene expression
; IGI:UniProtKB; .
GO
GO:1902966; P:positive regulation of protein localization to early endosome
; IGI:UniProtKB; .
GO
GO:0010737; P:protein kinase A signaling
; ISS:UniProtKB; .
GO
GO:0032231; P:regulation of actin filament bundle assembly
; IMP:UniProtKB; .
GO
GO:0008360; P:regulation of cell shape
; IMP:UniProtKB; .
GO
GO:0008361; P:regulation of cell size
; IGI:UniProtKB; .
GO
GO:0043087; P:regulation of GTPase activity
; IGI:UniProtKB; .
GO
GO:1902115; P:regulation of organelle assembly
; IGI:UniProtKB; .
GO
GO:0032487; P:regulation of Rap protein signal transduction
; ISS:UniProtKB; .
GO
GO:1900027; P:regulation of ruffle assembly
; IMP:UniProtKB; .
Gene3D
1.20.80.10; -
; 1; .
Gene3D
2.30.29.30; -
; 1; .
InterPro
IPR019749; Band_41_domain
; .
InterPro
IPR011174; ERM
; .
InterPro
IPR011259; ERM_C_dom
; .
InterPro
IPR000798; Ez/rad/moesin-like
; .
InterPro
IPR014352; FERM/acyl-CoA-bd_prot_3-hlx
; .
InterPro
IPR019748; FERM_central
; .
InterPro
IPR019747; FERM_CS
; .
InterPro
IPR000299; FERM_domain
; .
InterPro
IPR018979; FERM_N
; .
InterPro
IPR018980; FERM_PH-like_C
; .
InterPro
IPR008954; Moesin_tail
; .
InterPro
IPR011993; PH_dom-like
; .
InterPro
IPR029071; Ubiquitin-rel_dom
; .
Pfam
PF00769; ERM
; 1; .
Pfam
PF09380; FERM_C
; 1; .
Pfam
PF00373; FERM_M
; 1; .
Pfam
PF09379; FERM_N
; 1; .
PIRSF
PIRSF002305; ERM
; 1; .
PRINTS
PR00935; BAND41
; .
PRINTS
PR00661; ERMFAMILY
; .
SMART
SM00295; B41
; 1; .
SMART
SM01196; FERM_C
; 1; .
SUPFAM
SSF47031; SSF47031
; 1; .
SUPFAM
SSF48678; SSF48678
; 1; .
SUPFAM
SSF50729; SSF50729
; 1; .
SUPFAM
SSF54236; SSF54236
; 1; .
PROSITE
PS00660; FERM_1
; 1; .
PROSITE
PS00661; FERM_2
; 1; .
PROSITE
PS50057; FERM_3
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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